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Experiment Overview

Repository ID: FR-FCM-Z6DF Experiment name: Human mass cytometry immune phenotyping in DLBCL (MetaGate sample data) MIFlowCyt score: 53.75%
Primary researcher: Eivind Heggernes Ask PI/manager: Eivind Heggernes Ask Uploaded by: Eivind Heggernes Ask
Experiment dates: 2017-05-05 - 2017-09-18 Dataset uploaded: May 2023 Last updated: Dec 2024
Keywords: [diffuse large B-cell lymphoma] [data analysis] [human PBMC] [mass cytometry] Manuscripts: [39081571]
Organizations: Oslo University Hospital, Institute for Cancer Research, Oslo, (Norway)
University of Oslo, Institute of Clinical Medicine, Oslo, (Norway)
Purpose: Immune phenotyping of peripheral blood mononuclear cells (PBMCs) from patients with diffuse large B-cell lymphoma using two broad mass cytometry (CyTOF) panels. Samples from the 28 included patients were taken before and after immunochemotherapy, and compared with 17 healthy blood donors. This dataset was used as sample dataset in the MetaGate article, published in Patterns, 2024. Parts of the data has previously been published as FR-FCM-Z2VG.
Conclusion: Please refer to the published article.
Comments: Data was gated on single, viable CD45+ cells. Please refer to the published article for technical information and interpretation of the data.
Funding: Not disclosed
Quality control: Fluidigm EQ Four Element Calibration Beads and Fluidigm Cell-ID 20-Plex Barcoding Kits were used according to manufacturerer's instructions.


Experiment variables

Timepoints
· Before treatment DLBCL_P1_18_patient_pre.fcs · DLBCL_P1_19_patient_pre.fcs · DLBCL_P1_20_patient_pre.fcs · DLBCL_P1_21_patient_pre.fcs · DLBCL_P1_22_patient_pre.fcs · DLBCL_P1_23_patient_pre.fcs · DLBCL_P1_24_patient_pre.fcs · DLBCL_P1_25_patient_pre.fcs · DLBCL_P1_26_patient_pre.fcs · DLBCL_P1_27_patient_pre.fcs · DLBCL_P1_28_patient_pre.fcs · DLBCL_P1_29_patient_pre.fcs · DLBCL_P1_30_patient_pre.fcs · DLBCL_P1_31_patient_pre.fcs · DLBCL_P1_32_patient_pre.fcs · DLBCL_P1_33_patient_pre.fcs · DLBCL_P1_34_patient_pre.fcs · DLBCL_P1_35_patient_pre.fcs · DLBCL_P1_36_patient_pre.fcs · DLBCL_P1_37_patient_pre.fcs · DLBCL_P1_38_patient_pre.fcs · DLBCL_P1_39_patient_pre.fcs · DLBCL_P1_40_patient_pre.fcs · DLBCL_P1_41_patient_pre.fcs · DLBCL_P1_42_patient_pre.fcs · DLBCL_P1_43_patient_pre.fcs · DLBCL_P1_44_patient_pre.fcs · DLBCL_P1_45_patient_pre.fcs · DLBCL_P2_18_patient_pre.fcs · DLBCL_P2_19_patient_pre.fcs · DLBCL_P2_20_patient_pre.fcs · DLBCL_P2_21_patient_pre.fcs · DLBCL_P2_22_patient_pre.fcs · DLBCL_P2_23_patient_pre.fcs · DLBCL_P2_24_patient_pre.fcs · DLBCL_P2_25_patient_pre.fcs · DLBCL_P2_26_patient_pre.fcs · DLBCL_P2_27_patient_pre.fcs · DLBCL_P2_28_patient_pre.fcs · DLBCL_P2_29_patient_pre.fcs · DLBCL_P2_30_patient_pre.fcs · DLBCL_P2_31_patient_pre.fcs · DLBCL_P2_32_patient_pre.fcs · DLBCL_P2_33_patient_pre.fcs · DLBCL_P2_34_patient_pre.fcs · DLBCL_P2_35_patient_pre.fcs · DLBCL_P2_36_patient_pre.fcs · DLBCL_P2_37_patient_pre.fcs · DLBCL_P2_38_patient_pre.fcs · DLBCL_P2_39_patient_pre.fcs · DLBCL_P2_40_patient_pre.fcs · DLBCL_P2_41_patient_pre.fcs · DLBCL_P2_42_patient_pre.fcs · DLBCL_P2_43_patient_pre.fcs · DLBCL_P2_44_patient_pre.fcs · DLBCL_P2_45_patient_pre.fcs
· After treatment DLBCL_P1_18_patient_post.fcs · DLBCL_P1_19_patient_post.fcs · DLBCL_P1_20_patient_post.fcs · DLBCL_P1_21_patient_post.fcs · DLBCL_P1_22_patient_post.fcs · DLBCL_P1_23_patient_post.fcs · DLBCL_P1_24_patient_post.fcs · DLBCL_P1_25_patient_post.fcs · DLBCL_P1_26_patient_post.fcs · DLBCL_P1_27_patient_post.fcs · DLBCL_P1_28_patient_post.fcs · DLBCL_P1_29_patient_post.fcs · DLBCL_P1_30_patient_post.fcs · DLBCL_P1_31_patient_post.fcs · DLBCL_P1_32_patient_post.fcs · DLBCL_P1_33_patient_post.fcs · DLBCL_P1_34_patient_post.fcs · DLBCL_P1_35_patient_post.fcs · DLBCL_P1_36_patient_post.fcs · DLBCL_P1_37_patient_post.fcs · DLBCL_P1_38_patient_post.fcs · DLBCL_P1_39_patient_post.fcs · DLBCL_P1_40_patient_post.fcs · DLBCL_P1_41_patient_post.fcs · DLBCL_P1_42_patient_post.fcs · DLBCL_P1_43_patient_post.fcs · DLBCL_P1_44_patient_post.fcs · DLBCL_P1_45_patient_post.fcs · DLBCL_P2_18_patient_post.fcs · DLBCL_P2_19_patient_post.fcs · DLBCL_P2_20_patient_post.fcs · DLBCL_P2_21_patient_post.fcs · DLBCL_P2_22_patient_post.fcs · DLBCL_P2_23_patient_post.fcs · DLBCL_P2_24_patient_post.fcs · DLBCL_P2_25_patient_post.fcs · DLBCL_P2_26_patient_post.fcs · DLBCL_P2_27_patient_post.fcs · DLBCL_P2_28_patient_post.fcs · DLBCL_P2_29_patient_post.fcs · DLBCL_P2_30_patient_post.fcs · DLBCL_P2_31_patient_post.fcs · DLBCL_P2_32_patient_post.fcs · DLBCL_P2_33_patient_post.fcs · DLBCL_P2_34_patient_post.fcs · DLBCL_P2_35_patient_post.fcs · DLBCL_P2_36_patient_post.fcs · DLBCL_P2_37_patient_post.fcs · DLBCL_P2_38_patient_post.fcs · DLBCL_P2_39_patient_post.fcs · DLBCL_P2_40_patient_post.fcs · DLBCL_P2_41_patient_post.fcs · DLBCL_P2_42_patient_post.fcs · DLBCL_P2_43_patient_post.fcs · DLBCL_P2_44_patient_post.fcs · DLBCL_P2_45_patient_post.fcs
· Healthy controls DLBCL_P1_10_healthy.fcs · DLBCL_P1_11_healthy.fcs · DLBCL_P1_12_healthy.fcs · DLBCL_P1_13_healthy.fcs · DLBCL_P1_14_healthy.fcs · DLBCL_P1_15_healthy.fcs · DLBCL_P1_16_healthy.fcs · DLBCL_P1_17_healthy.fcs · DLBCL_P1_1_healthy.fcs · DLBCL_P1_2_healthy.fcs · DLBCL_P1_3_healthy.fcs · DLBCL_P1_4_healthy.fcs · DLBCL_P1_5_healthy.fcs · DLBCL_P1_6_healthy.fcs · DLBCL_P1_7_healthy.fcs · DLBCL_P1_8_healthy.fcs · DLBCL_P1_9_healthy.fcs · DLBCL_P2_10_healthy.fcs · DLBCL_P2_11_healthy.fcs · DLBCL_P2_12_healthy.fcs · DLBCL_P2_13_healthy.fcs · DLBCL_P2_14_healthy.fcs · DLBCL_P2_15_healthy.fcs · DLBCL_P2_17_healthy.fcs · DLBCL_P2_1_healthy.fcs · DLBCL_P2_2_healthy.fcs · DLBCL_P2_3_healthy.fcs · DLBCL_P2_5_healthy.fcs · DLBCL_P2_6_healthy.fcs · DLBCL_P2_7_healthy.fcs · DLBCL_P2_9_healthy.fcs

Sample Type
· PBMC DLBCL_P1_10_healthy.fcs · DLBCL_P1_11_healthy.fcs · DLBCL_P1_12_healthy.fcs · DLBCL_P1_13_healthy.fcs · DLBCL_P1_14_healthy.fcs · DLBCL_P1_15_healthy.fcs · DLBCL_P1_16_healthy.fcs · DLBCL_P1_17_healthy.fcs · DLBCL_P1_18_patient_post.fcs · DLBCL_P1_18_patient_pre.fcs · DLBCL_P1_19_patient_post.fcs · DLBCL_P1_19_patient_pre.fcs · DLBCL_P1_1_healthy.fcs · DLBCL_P1_20_patient_post.fcs · DLBCL_P1_20_patient_pre.fcs · DLBCL_P1_21_patient_post.fcs · DLBCL_P1_21_patient_pre.fcs · DLBCL_P1_22_patient_post.fcs · DLBCL_P1_22_patient_pre.fcs · DLBCL_P1_23_patient_post.fcs · DLBCL_P1_23_patient_pre.fcs · DLBCL_P1_24_patient_post.fcs · DLBCL_P1_24_patient_pre.fcs · DLBCL_P1_25_patient_post.fcs · DLBCL_P1_25_patient_pre.fcs · DLBCL_P1_26_patient_post.fcs · DLBCL_P1_26_patient_pre.fcs · DLBCL_P1_27_patient_post.fcs · DLBCL_P1_27_patient_pre.fcs · DLBCL_P1_28_patient_post.fcs · DLBCL_P1_28_patient_pre.fcs · DLBCL_P1_29_patient_post.fcs · DLBCL_P1_29_patient_pre.fcs · DLBCL_P1_2_healthy.fcs · DLBCL_P1_30_patient_post.fcs · DLBCL_P1_30_patient_pre.fcs · DLBCL_P1_31_patient_post.fcs · DLBCL_P1_31_patient_pre.fcs · DLBCL_P1_32_patient_post.fcs · DLBCL_P1_32_patient_pre.fcs · DLBCL_P1_33_patient_post.fcs · DLBCL_P1_33_patient_pre.fcs · DLBCL_P1_34_patient_post.fcs · DLBCL_P1_34_patient_pre.fcs · DLBCL_P1_35_patient_post.fcs · DLBCL_P1_35_patient_pre.fcs · DLBCL_P1_36_patient_post.fcs · DLBCL_P1_36_patient_pre.fcs · DLBCL_P1_37_patient_post.fcs · DLBCL_P1_37_patient_pre.fcs · DLBCL_P1_38_patient_post.fcs · DLBCL_P1_38_patient_pre.fcs · DLBCL_P1_39_patient_post.fcs · DLBCL_P1_39_patient_pre.fcs · DLBCL_P1_3_healthy.fcs · DLBCL_P1_40_patient_post.fcs · DLBCL_P1_40_patient_pre.fcs · DLBCL_P1_41_patient_post.fcs · DLBCL_P1_41_patient_pre.fcs · DLBCL_P1_42_patient_post.fcs · DLBCL_P1_42_patient_pre.fcs · DLBCL_P1_43_patient_post.fcs · DLBCL_P1_43_patient_pre.fcs · DLBCL_P1_44_patient_post.fcs · DLBCL_P1_44_patient_pre.fcs · DLBCL_P1_45_patient_post.fcs · DLBCL_P1_45_patient_pre.fcs · DLBCL_P1_4_healthy.fcs · DLBCL_P1_5_healthy.fcs · DLBCL_P1_6_healthy.fcs · DLBCL_P1_7_healthy.fcs · DLBCL_P1_8_healthy.fcs · DLBCL_P1_9_healthy.fcs · DLBCL_P2_10_healthy.fcs · DLBCL_P2_11_healthy.fcs · DLBCL_P2_12_healthy.fcs · DLBCL_P2_13_healthy.fcs · DLBCL_P2_14_healthy.fcs · DLBCL_P2_15_healthy.fcs · DLBCL_P2_17_healthy.fcs · DLBCL_P2_18_patient_post.fcs · DLBCL_P2_18_patient_pre.fcs · DLBCL_P2_19_patient_post.fcs · DLBCL_P2_19_patient_pre.fcs · DLBCL_P2_1_healthy.fcs · DLBCL_P2_20_patient_post.fcs · DLBCL_P2_20_patient_pre.fcs · DLBCL_P2_21_patient_post.fcs · DLBCL_P2_21_patient_pre.fcs · DLBCL_P2_22_patient_post.fcs · DLBCL_P2_22_patient_pre.fcs · DLBCL_P2_23_patient_post.fcs · DLBCL_P2_23_patient_pre.fcs · DLBCL_P2_24_patient_post.fcs · DLBCL_P2_24_patient_pre.fcs · DLBCL_P2_25_patient_post.fcs · DLBCL_P2_25_patient_pre.fcs · DLBCL_P2_26_patient_post.fcs · DLBCL_P2_26_patient_pre.fcs · DLBCL_P2_27_patient_post.fcs · DLBCL_P2_27_patient_pre.fcs · DLBCL_P2_28_patient_post.fcs · DLBCL_P2_28_patient_pre.fcs · DLBCL_P2_29_patient_post.fcs · DLBCL_P2_29_patient_pre.fcs · DLBCL_P2_2_healthy.fcs · DLBCL_P2_30_patient_post.fcs · DLBCL_P2_30_patient_pre.fcs · DLBCL_P2_31_patient_post.fcs · DLBCL_P2_31_patient_pre.fcs · DLBCL_P2_32_patient_post.fcs · DLBCL_P2_32_patient_pre.fcs · DLBCL_P2_33_patient_post.fcs · DLBCL_P2_33_patient_pre.fcs · DLBCL_P2_34_patient_post.fcs · DLBCL_P2_34_patient_pre.fcs · DLBCL_P2_35_patient_post.fcs · DLBCL_P2_35_patient_pre.fcs · DLBCL_P2_36_patient_post.fcs · DLBCL_P2_36_patient_pre.fcs · DLBCL_P2_37_patient_post.fcs · DLBCL_P2_37_patient_pre.fcs · DLBCL_P2_38_patient_post.fcs · DLBCL_P2_38_patient_pre.fcs · DLBCL_P2_39_patient_post.fcs · DLBCL_P2_39_patient_pre.fcs · DLBCL_P2_3_healthy.fcs · DLBCL_P2_40_patient_post.fcs · DLBCL_P2_40_patient_pre.fcs · DLBCL_P2_41_patient_post.fcs · DLBCL_P2_41_patient_pre.fcs · DLBCL_P2_42_patient_post.fcs · DLBCL_P2_42_patient_pre.fcs · DLBCL_P2_43_patient_post.fcs · DLBCL_P2_43_patient_pre.fcs · DLBCL_P2_44_patient_post.fcs · DLBCL_P2_44_patient_pre.fcs · DLBCL_P2_45_patient_post.fcs · DLBCL_P2_45_patient_pre.fcs · DLBCL_P2_5_healthy.fcs · DLBCL_P2_6_healthy.fcs · DLBCL_P2_7_healthy.fcs · DLBCL_P2_9_healthy.fcs

Conditions
· Healthy controls DLBCL_P1_10_healthy.fcs · DLBCL_P1_11_healthy.fcs · DLBCL_P1_12_healthy.fcs · DLBCL_P1_13_healthy.fcs · DLBCL_P1_14_healthy.fcs · DLBCL_P1_15_healthy.fcs · DLBCL_P1_16_healthy.fcs · DLBCL_P1_17_healthy.fcs · DLBCL_P1_1_healthy.fcs · DLBCL_P1_2_healthy.fcs · DLBCL_P1_3_healthy.fcs · DLBCL_P1_4_healthy.fcs · DLBCL_P1_5_healthy.fcs · DLBCL_P1_6_healthy.fcs · DLBCL_P1_7_healthy.fcs · DLBCL_P1_8_healthy.fcs · DLBCL_P1_9_healthy.fcs · DLBCL_P2_10_healthy.fcs · DLBCL_P2_11_healthy.fcs · DLBCL_P2_12_healthy.fcs · DLBCL_P2_13_healthy.fcs · DLBCL_P2_14_healthy.fcs · DLBCL_P2_15_healthy.fcs · DLBCL_P2_17_healthy.fcs · DLBCL_P2_1_healthy.fcs · DLBCL_P2_2_healthy.fcs · DLBCL_P2_3_healthy.fcs · DLBCL_P2_5_healthy.fcs · DLBCL_P2_6_healthy.fcs · DLBCL_P2_7_healthy.fcs · DLBCL_P2_9_healthy.fcs
· Patients DLBCL_P1_18_patient_post.fcs · DLBCL_P1_18_patient_pre.fcs · DLBCL_P1_19_patient_post.fcs · DLBCL_P1_19_patient_pre.fcs · DLBCL_P1_20_patient_post.fcs · DLBCL_P1_20_patient_pre.fcs · DLBCL_P1_21_patient_post.fcs · DLBCL_P1_21_patient_pre.fcs · DLBCL_P1_22_patient_post.fcs · DLBCL_P1_22_patient_pre.fcs · DLBCL_P1_23_patient_post.fcs · DLBCL_P1_23_patient_pre.fcs · DLBCL_P1_24_patient_post.fcs · DLBCL_P1_24_patient_pre.fcs · DLBCL_P1_25_patient_post.fcs · DLBCL_P1_25_patient_pre.fcs · DLBCL_P1_26_patient_post.fcs · DLBCL_P1_26_patient_pre.fcs · DLBCL_P1_27_patient_post.fcs · DLBCL_P1_27_patient_pre.fcs · DLBCL_P1_28_patient_post.fcs · DLBCL_P1_28_patient_pre.fcs · DLBCL_P1_29_patient_post.fcs · DLBCL_P1_29_patient_pre.fcs · DLBCL_P1_30_patient_post.fcs · DLBCL_P1_30_patient_pre.fcs · DLBCL_P1_31_patient_post.fcs · DLBCL_P1_31_patient_pre.fcs · DLBCL_P1_32_patient_post.fcs · DLBCL_P1_32_patient_pre.fcs · DLBCL_P1_33_patient_post.fcs · DLBCL_P1_33_patient_pre.fcs · DLBCL_P1_34_patient_post.fcs · DLBCL_P1_34_patient_pre.fcs · DLBCL_P1_35_patient_post.fcs · DLBCL_P1_35_patient_pre.fcs · DLBCL_P1_36_patient_post.fcs · DLBCL_P1_36_patient_pre.fcs · DLBCL_P1_37_patient_post.fcs · DLBCL_P1_37_patient_pre.fcs · DLBCL_P1_38_patient_post.fcs · DLBCL_P1_38_patient_pre.fcs · DLBCL_P1_39_patient_post.fcs · DLBCL_P1_39_patient_pre.fcs · DLBCL_P1_40_patient_post.fcs · DLBCL_P1_40_patient_pre.fcs · DLBCL_P1_41_patient_post.fcs · DLBCL_P1_41_patient_pre.fcs · DLBCL_P1_42_patient_post.fcs · DLBCL_P1_42_patient_pre.fcs · DLBCL_P1_43_patient_post.fcs · DLBCL_P1_43_patient_pre.fcs · DLBCL_P1_44_patient_post.fcs · DLBCL_P1_44_patient_pre.fcs · DLBCL_P1_45_patient_post.fcs · DLBCL_P1_45_patient_pre.fcs · DLBCL_P2_18_patient_post.fcs · DLBCL_P2_18_patient_pre.fcs · DLBCL_P2_19_patient_post.fcs · DLBCL_P2_19_patient_pre.fcs · DLBCL_P2_20_patient_post.fcs · DLBCL_P2_20_patient_pre.fcs · DLBCL_P2_21_patient_post.fcs · DLBCL_P2_21_patient_pre.fcs · DLBCL_P2_22_patient_post.fcs · DLBCL_P2_22_patient_pre.fcs · DLBCL_P2_23_patient_post.fcs · DLBCL_P2_23_patient_pre.fcs · DLBCL_P2_24_patient_post.fcs · DLBCL_P2_24_patient_pre.fcs · DLBCL_P2_25_patient_post.fcs · DLBCL_P2_25_patient_pre.fcs · DLBCL_P2_26_patient_post.fcs · DLBCL_P2_26_patient_pre.fcs · DLBCL_P2_27_patient_post.fcs · DLBCL_P2_27_patient_pre.fcs · DLBCL_P2_28_patient_post.fcs · DLBCL_P2_28_patient_pre.fcs · DLBCL_P2_29_patient_post.fcs · DLBCL_P2_29_patient_pre.fcs · DLBCL_P2_30_patient_post.fcs · DLBCL_P2_30_patient_pre.fcs · DLBCL_P2_31_patient_post.fcs · DLBCL_P2_31_patient_pre.fcs · DLBCL_P2_32_patient_post.fcs · DLBCL_P2_32_patient_pre.fcs · DLBCL_P2_33_patient_post.fcs · DLBCL_P2_33_patient_pre.fcs · DLBCL_P2_34_patient_post.fcs · DLBCL_P2_34_patient_pre.fcs · DLBCL_P2_35_patient_post.fcs · DLBCL_P2_35_patient_pre.fcs · DLBCL_P2_36_patient_post.fcs · DLBCL_P2_36_patient_pre.fcs · DLBCL_P2_37_patient_post.fcs · DLBCL_P2_37_patient_pre.fcs · DLBCL_P2_38_patient_post.fcs · DLBCL_P2_38_patient_pre.fcs · DLBCL_P2_39_patient_post.fcs · DLBCL_P2_39_patient_pre.fcs · DLBCL_P2_40_patient_post.fcs · DLBCL_P2_40_patient_pre.fcs · DLBCL_P2_41_patient_post.fcs · DLBCL_P2_41_patient_pre.fcs · DLBCL_P2_42_patient_post.fcs · DLBCL_P2_42_patient_pre.fcs · DLBCL_P2_43_patient_post.fcs · DLBCL_P2_43_patient_pre.fcs · DLBCL_P2_44_patient_post.fcs · DLBCL_P2_44_patient_pre.fcs · DLBCL_P2_45_patient_post.fcs · DLBCL_P2_45_patient_pre.fcs

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