Experiment Overview

Repository ID: FR-FCM-ZYJP Experiment name: Single-cell Map of Diverse Immune Phenotypes in the Breast Tumor Microenvironment MIFlowCyt score: 18.75%
Primary researcher: Andrew Cornish PI/manager: Andrew Cornish Uploaded by: Andrew Cornish
Experiment dates: 2018-05-07 - 2018-05-07 Dataset uploaded: May 2018 Last updated: May 2018
Keywords: None Manuscripts:
Organizations: Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, New York (United States)
Purpose: To determine the degree to which populations of intratumoral T cells, especially but not limited to T regs, initially found in single cell RNA sequencing data may be reproduced in mass cytometry data.
Conclusion: None
Comments: The data included for each of the 3 patients (BC12, BC13, and BC14, respectively) is presented in nine total files. For each of the patients the following three files are provided: 1) Raw data, with all cells (includes both barcoded stock PBMCs as well as TILs from the patient). 2) Debarcoded and bead-normalized TILs (with PBMCs and beads removed). 3) Beads removed from file 2) above.
Funding: Not disclosed
Quality control: None
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