FlowRepository does not require you to deposit anything. However, there are different data sharing policies implemented by different journals and funding agencies, which you may be asked to follow if you wish to publish a certain manuscript or receive certain funding for your research.
Cytometry A
Cytometry A requires you to follow
MIFlowCyt
(Minimum Information about a Flow Cytometry Experiment) whenever applicable. This includes making your data
and MIFlowCyt compliant annotations available.
Cytometry A further
recommends
that data is submitted to FlowRepository prior to manuscript submission.
However, you are allowed to choose an alternative method, e.g., providing MIFlowCyt annotations in an attached document and
sharing data individually with every one who expresses interest.
PLOS
Since their inception, PLOS journals have requested data to be available. Based on the
PLOS's Data Policy,
the underlying data should be made freely available for researchers to use, wherever this is legal and ethical.
Data availability allows replication, reanalysis, new analysis, interpretation, or inclusion into meta-analyses,
and facilitates reproducibility of research, all providing a better 'bang for the buck' out of scientific research,
much of which is funded from public or nonprofit sources.
Specifically, PLOS requests that the
minimal dataset used to reach the conclusions drawn in the manuscript with related metadata and methods, and any
additional data required to replicate the reported study findings in their entirety
are made available.
As stated in
PLOS Reporting Guidelines for Specific Study Designs
the
MIBBI Portal
(Minimum Information for Biological and Biomedical Investigations) should be reviewed for prescriptive checklists of metadata required.
For flow cytometry, MIBBI specifies that
MIFlowCyt
(Minimum Information about a Flow Cytometry Experiment) shall to be followed.
In summary, PLOS policies require you to
make your data and annotations available,
but not necessarily to "deposit" those anywhere.
We suggest uploading your data to FlowRepository as we feel it is the easiest way to satisfy PLOS requirements for most researchers.
Other journals and funding agencies
Many other journals require your data and metadata to be made available.
In flow cytometry, the required metadata commonly includes the checklist specified by
MIFlowCyt.
This list includes reputable journals, including all
Nature
journals.
Similarly, many funding agencies, including the
NIH
require you to share data generated by research that they have funded.
In some cases, you are asked to deposit data in appropriate repositories whenever these are available.
In other cases, it is up to you how you decide to share your data.
Please refer to the appropriate policies of your journal or funding agency.
What if I don't follow the policies and don't share my data?
At FlowRepository, we believe that researchers should be positively motivated to share their data rather than using sticks,
so we will not try to penalize you in any way.
However, there may be different approaches taken by funding agencies and journals. A funding agency may try to reclaim
the funding, or you may have difficulties obtaining additional funding in the future.
Similarly with the journals, which in extreme cases may decide to withdraw your publication (e.g. as per
PLOS policy
on availability of materials).