Experiment Overview
| Repository ID: | FR-FCM-Z244 | Experiment name: | Identification of disease-associated immune signatures following bone marrow transplantation | MIFlowCyt score: | 53.75% |
| Primary researcher: | Felix Hartmann | PI/manager: | Felix Hartmann | Uploaded by: | Felix Hartmann |
| Experiment dates: | 2018-01-01 - 2018-12-31 | Dataset uploaded: | May 2019 | Last updated: | Jul 2019 |
| Keywords: | [CyTOF] [Bone marrow transplantation] [clinical trial] [clinical] | Manuscripts: | [31315057] | ||
| Organizations: |
Stanford University, Stanford, (USA)
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| Purpose: | Comprehensively monitor immune composition across time and identify disease-associated immune signatures following bone marrow transplantation using the described reference panel. | ||||
| Conclusion: | Patients experiencing GvHD displayed a reduced frequency of CD27- B cells and lower frequencies of naive CD4+ T cells. | ||||
| Comments: | None | ||||
| Funding: | Not disclosed | ||||
| Quality control: | Samples are matched across various timepoints (days 30 and 90) post bone marrow transplantation | ||||
Experiment variables
| Timepoints | |
|---|---|
| · day_30 | BMT01_D30.fcs · BMT02_D30.fcs · BMT03_D30.fcs · BMT04_D30.fcs · BMT05_D30.fcs · BMT06_D30.fcs · BMT07_D30.fcs · BMT08_D30.fcs · BMT09_D30.fcs · BMT10_D30.fcs · BMT11_D30.fcs · BMT12_D30.fcs · BMT13_D30.fcs · BMT14_D30.fcs · BMT15_D30.fcs |
| · day_90 | BMT01_D90.fcs · BMT02_D90.fcs · BMT03_D90.fcs · BMT04_D90.fcs · BMT05_D90.fcs · BMT06_D90.fcs · BMT07_D90.fcs · BMT09_D90.fcs · BMT11_D90.fcs · BMT12_D90.fcs · BMT13_D90.fcs · BMT14_D90.fcs · BMT15_D90.fcs |
| Sample Type | |
|---|---|
| · PBMC | BMT01_D30.fcs · BMT01_D90.fcs · BMT02_D30.fcs · BMT02_D90.fcs · BMT03_D30.fcs · BMT03_D90.fcs · BMT04_D30.fcs · BMT04_D90.fcs · BMT05_D30.fcs · BMT05_D90.fcs · BMT06_D30.fcs · BMT06_D90.fcs · BMT07_D30.fcs · BMT07_D90.fcs · BMT08_D30.fcs · BMT09_D30.fcs · BMT09_D90.fcs · BMT10_D30.fcs · BMT11_D30.fcs · BMT11_D90.fcs · BMT12_D30.fcs · BMT12_D90.fcs · BMT13_D30.fcs · BMT13_D90.fcs · BMT14_D30.fcs · BMT14_D90.fcs · BMT15_D30.fcs · BMT15_D90.fcs |
| Individuals | |
|---|---|
| · BMT01 | BMT01_D30.fcs · BMT01_D90.fcs |
| · BMT02 | BMT02_D30.fcs · BMT02_D90.fcs |
| · BMT03 | BMT03_D30.fcs · BMT03_D90.fcs |
| · BMT04 | BMT04_D30.fcs · BMT04_D90.fcs |
| · BMT05 | BMT05_D30.fcs · BMT05_D90.fcs |
| · BMT06 | BMT06_D30.fcs · BMT06_D90.fcs |
| · BMT07 | BMT07_D30.fcs · BMT07_D90.fcs |
| · BMT08 | BMT08_D30.fcs |
| · BMT09 | BMT09_D30.fcs · BMT09_D90.fcs |
| · BMT10 | BMT10_D30.fcs |
| · BMT11 | BMT11_D30.fcs · BMT11_D90.fcs |
| · BMT12 | BMT12_D30.fcs · BMT12_D90.fcs |
| · BMT13 | BMT13_D30.fcs · BMT13_D90.fcs |
| · BMT14 | BMT14_D30.fcs · BMT14_D90.fcs |
| · BMT15 | BMT15_D30.fcs · BMT15_D90.fcs |
| Conditions | |
|---|---|
| · unstimulated | BMT01_D30.fcs · BMT01_D90.fcs · BMT02_D30.fcs · BMT02_D90.fcs · BMT03_D30.fcs · BMT03_D90.fcs · BMT04_D30.fcs · BMT04_D90.fcs · BMT05_D30.fcs · BMT05_D90.fcs · BMT06_D30.fcs · BMT06_D90.fcs · BMT07_D30.fcs · BMT07_D90.fcs · BMT08_D30.fcs · BMT09_D30.fcs · BMT09_D90.fcs · BMT10_D30.fcs · BMT11_D30.fcs · BMT11_D90.fcs · BMT12_D30.fcs · BMT12_D90.fcs · BMT13_D30.fcs · BMT13_D90.fcs · BMT14_D30.fcs · BMT14_D90.fcs · BMT15_D30.fcs · BMT15_D90.fcs |
