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Experiment: Rearing water shrimp (off site data)
ID: FR-FCM-Z2LN
Primary Researcher: Jasmine Heyse
MIFlowCyt Score: 22.50%

Experiment Overview

Repository ID:	FR-FCM-Z2LN	Experiment name:	Rearing water shrimp (off site data)	MIFlowCyt score:	22.50%
Primary researcher:	Jasmine Heyse	PI/manager:	Nico Boon	Uploaded by:	Jasmine Heyse
Experiment dates:	2020-06-01 -	Dataset uploaded:	May 2020	Last updated:	Aug 2020
Keywords:	None		Manuscripts:
Organizations:	Ghent University, Centre for Microbial Ecology and Technology, Gent, (Belgium)
Purpose:	Part of a study on the rearing water microbiomes in white leg shrimp (Litopenaeus vannamei) larviculture.
Conclusion:	None
Comments:	The metadata is provided in a separate csv-file. The data-analysis pipeline is available on GitHub (https://github.com/jeheyse/SourceTrackingDynamicsShrimp).
Funding:	Not disclosed
Quality control:	Instrument performance was checked daily by fluorescent beads.

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The following open access article describes how to upload and annotate flow cytometry data sets: Spidlen J, Breuer K and Brinkman R. Preparing a Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) Compliant Manuscript Using the International Society for Advancement of Cytometry (ISAC) FCS File Repository (FlowRepository.org). Current Protocols in Cytometry, UNIT 10.18, July 2012.
We also have a Quick start guide and a FAQ section.
You may download slides from our Workshop at CYTO 2012: Publishing MIFlowCyt Compliant Data to ISAC’s FlowRepository.org for Cytometry A and Other Journals
Additional links and help options are listed in our support page.
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Citing FlowRepository

Please reference us by citing:

Spidlen J, Breuer K, Rosenberg C, Kotecha N and Brinkman RR. FlowRepository - A Resource of Annotated Flow Cytometry Datasets Associated with Peer-reviewed Publications. Cytometry A. 2012 Sep; 81(9):727-31..

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