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Experiment Overview

Repository ID: FR-FCM-Z2LX Experiment name: Kotliar and Lin et al., Single-cell profiling of Ebola infection in vivo reveals viral and host transcriptional dynamics MIFlowCyt score: 24.75%
Primary researcher: Zainab Rahil PI/manager: Zainab Rahil Uploaded by: Zainab Rahil
Experiment dates: 2020-05-20 - Dataset uploaded: May 2020 Last updated: May 2020
Keywords: [immunology] [Non human primates] Manuscripts:
Organizations: Stanford University School of Medicine, Pathology, Palo Alto, CA (USA)
Purpose: Evaluation of PBMCs from rhesus macaques challenged with EBOV/Kikwit
Conclusion: None
Comments: None
Funding: Not disclosed
Quality control: None


Experiment variables

Timepoints
· -30 NHP13_Day-30_EBOV.fcs · NHP14_Day-30_EBOV.fcs · NHP15_Day-30_EBOV.fcs · NHP16_Day-30_EBOV.fcs · NHP17_Day-30_EBOV.fcs · NHP18_Day-30_EBOV.fcs · NHP19_Day-30_EBOV.fcs · NHP20_Day-30_EBOV.fcs · NHP21_Day-30_EBOV.fcs · NHP22_Day-30_EBOV.fcs · NHP23_Day-30_EBOV.fcs · NHP24_Day-30_EBOV.fcs
· -14 NHP10_Day-14_EBOV.fcs · NHP11_Day-14_EBOV.fcs · NHP12_Day-14_EBOV.fcs · NHP13_Day-14_EBOV.fcs · NHP14_Day-14_EBOV.fcs · NHP15_Day-14_EBOV.fcs · NHP16_Day-14_EBOV.fcs · NHP17_Day-14_EBOV.fcs · NHP18_Day-14_EBOV.fcs · NHP19_Day-14_EBOV.fcs · NHP20_Day-14_EBOV.fcs · NHP21_Day-14_EBOV.fcs · NHP22_Day-14_EBOV.fcs · NHP23_Day-14_EBOV.fcs · NHP24_Day-14_EBOV.fcs · NHP7_Day-14_EBOV.fcs · NHP8_Day-14_EBOV.fcs · NHP9_Day-14_EBOV.fcs · NHPC2_Day-14_Control.fcs · NHPC3_Day-14_Control.fcs
· -4 NHP10_Day-4_EBOV.fcs · NHP11_Day-4_EBOV.fcs · NHP12_Day-4_EBOV.fcs · NHP7_Day-4_EBOV.fcs · NHP8_Day-4_EBOV.fcs · NHP9_Day-4_EBOV.fcs
· 0 NHP13_Day0_EBOV.fcs · NHP14_Day0_EBOV.fcs · NHP15_Day0_EBOV.fcs · NHP16_Day0_EBOV.fcs · NHP17_Day0_EBOV.fcs · NHP18_Day0_EBOV.fcs
· 1 NHP13_Day1_EBOV.fcs · NHP14_Day1_EBOV.fcs · NHP15_Day1_EBOV.fcs · NHP16_Day1_EBOV.fcs · NHP17_Day1_EBOV.fcs · NHP18_Day1_EBOV.fcs
· 2 NHP19_Day2_EBOV.fcs · NHP20_Day2_EBOV.fcs · NHP21_Day2_EBOV.fcs · NHP22_Day2_EBOV.fcs · NHP23_Day2_EBOV.fcs · NHP24_Day2_EBOV.fcs
· 3 NHP10_Day3_EBOV.fcs · NHP11_Day3_EBOV.fcs · NHP12_Day3_EBOV.fcs · NHP13_Day3_EBOV.fcs · NHP14_Day3_EBOV.fcs · NHP15_Day3_EBOV.fcs · NHP16_Day3_EBOV.fcs · NHP17_Day3_EBOV.fcs · NHP18_Day3_EBOV.fcs · NHP7_Day3_EBOV.fcs · NHP8_Day3_EBOV.fcs · NHP9_Day3_EBOV.fcs
· 5 NHP10_Day5_EBOV.fcs · NHP11_Day5_EBOV.fcs · NHP12_Day5_EBOV.fcs · NHP16_Day5_EBOV.fcs · NHP17_Day5_EBOV.fcs · NHP18_Day5_EBOV.fcs · NHP7_Day5_EBOV.fcs · NHP8_Day5_EBOV.fcs · NHP9_Day5_EBOV.fcs
· 6 NHP11_Day6_EBOV.fcs · NHP22_Day6_EBOV.fcs · NHP23_Day6_EBOV.fcs · NHP24_Day6_EBOV.fcs · NHP8_Day6_EBOV.fcs
· 7 NHP10_Day7_EBOV.fcs · NHP7_Day7_EBOV.fcs
· 8 NHP12_Day8_EBOV.fcs · NHP9_Day8_EBOV.fcs
· 4 NHP19_Day4_EBOV.fcs · NHP20_Day4_EBOV.fcs · NHP21_Day4_EBOV.fcs · NHP22_Day4_EBOV.fcs · NHP23_Day4_EBOV.fcs · NHP24_Day4_EBOV.fcs
· -21 NHPC1_Day-21_Control.fcs
· -7 NHPC1_Day-7_Control.fcs
· -2 NHPC2_Day-2_Control.fcs · NHPC3_Day-2_Control.fcs

Individuals
· NHP7 NHP7_Day-14_EBOV.fcs · NHP7_Day-4_EBOV.fcs · NHP7_Day3_EBOV.fcs · NHP7_Day5_EBOV.fcs · NHP7_Day7_EBOV.fcs
· NHP8 NHP8_Day-14_EBOV.fcs · NHP8_Day-4_EBOV.fcs · NHP8_Day3_EBOV.fcs · NHP8_Day5_EBOV.fcs · NHP8_Day6_EBOV.fcs
· NHP9 NHP9_Day-14_EBOV.fcs · NHP9_Day-4_EBOV.fcs · NHP9_Day3_EBOV.fcs · NHP9_Day5_EBOV.fcs · NHP9_Day8_EBOV.fcs
· NHp10 NHP10_Day-14_EBOV.fcs · NHP10_Day-4_EBOV.fcs · NHP10_Day3_EBOV.fcs · NHP10_Day5_EBOV.fcs · NHP10_Day7_EBOV.fcs
· NHP11 NHP11_Day-14_EBOV.fcs · NHP11_Day-4_EBOV.fcs · NHP11_Day3_EBOV.fcs · NHP11_Day5_EBOV.fcs · NHP11_Day6_EBOV.fcs
· NHP12 NHP12_Day-14_EBOV.fcs · NHP12_Day-4_EBOV.fcs · NHP12_Day3_EBOV.fcs · NHP12_Day5_EBOV.fcs · NHP12_Day8_EBOV.fcs
· NHP13 NHP13_Day-14_EBOV.fcs · NHP13_Day-30_EBOV.fcs · NHP13_Day0_EBOV.fcs · NHP13_Day1_EBOV.fcs · NHP13_Day3_EBOV.fcs
· NHP14 NHP14_Day-14_EBOV.fcs · NHP14_Day-30_EBOV.fcs · NHP14_Day0_EBOV.fcs · NHP14_Day1_EBOV.fcs · NHP14_Day3_EBOV.fcs
· NHP15 NHP15_Day-14_EBOV.fcs · NHP15_Day-30_EBOV.fcs · NHP15_Day0_EBOV.fcs · NHP15_Day1_EBOV.fcs · NHP15_Day3_EBOV.fcs
· NHP16 NHP16_Day-14_EBOV.fcs · NHP16_Day-30_EBOV.fcs · NHP16_Day0_EBOV.fcs · NHP16_Day1_EBOV.fcs · NHP16_Day3_EBOV.fcs · NHP16_Day5_EBOV.fcs
· NHP17 NHP17_Day-14_EBOV.fcs · NHP17_Day-30_EBOV.fcs · NHP17_Day0_EBOV.fcs · NHP17_Day1_EBOV.fcs · NHP17_Day3_EBOV.fcs · NHP17_Day5_EBOV.fcs
· NHP18 NHP18_Day-14_EBOV.fcs · NHP18_Day-30_EBOV.fcs · NHP18_Day0_EBOV.fcs · NHP18_Day1_EBOV.fcs · NHP18_Day3_EBOV.fcs · NHP18_Day5_EBOV.fcs
· NHP19 NHP19_Day-14_EBOV.fcs · NHP19_Day-30_EBOV.fcs · NHP19_Day2_EBOV.fcs · NHP19_Day4_EBOV.fcs
· NHP20 NHP20_Day-14_EBOV.fcs · NHP20_Day-30_EBOV.fcs · NHP20_Day2_EBOV.fcs · NHP20_Day4_EBOV.fcs
· NHP21 NHP21_Day-14_EBOV.fcs · NHP21_Day-30_EBOV.fcs · NHP21_Day2_EBOV.fcs · NHP21_Day4_EBOV.fcs
· NHP22 NHP22_Day-14_EBOV.fcs · NHP22_Day-30_EBOV.fcs · NHP22_Day2_EBOV.fcs · NHP22_Day4_EBOV.fcs · NHP22_Day6_EBOV.fcs
· NHP23 NHP23_Day-14_EBOV.fcs · NHP23_Day-30_EBOV.fcs · NHP23_Day2_EBOV.fcs · NHP23_Day4_EBOV.fcs · NHP23_Day6_EBOV.fcs
· NHP24 NHP24_Day-14_EBOV.fcs · NHP24_Day-30_EBOV.fcs · NHP24_Day2_EBOV.fcs · NHP24_Day4_EBOV.fcs · NHP24_Day6_EBOV.fcs
· NHPC1 NHPC1_Day-21_Control.fcs · NHPC1_Day-7_Control.fcs
· NHPC2 NHPC2_Day-14_Control.fcs · NHPC2_Day-2_Control.fcs
· NHPC3 NHPC3_Day-14_Control.fcs · NHPC3_Day-2_Control.fcs

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