FlowRepository

Notice: Temporary Suspension of New Experiment Creation
We have temporarily disabled the creation of new experiments as we are continuously running out of space. This issue has been impacting both uploads and downloads from FlowRepository. By taking this step, we aim to make downloads of existing data more reliable.
We apologize for the inconvenience and appreciate your understanding as we work on upgrading our hardware and improving the overall solution.
Thank you for your patience.

Experiment: Mock community according to Cichocki et al., 2020
ID: FR-FCM-Z3MC
Primary Researcher: Jasmine Heyse
MIFlowCyt Score: 19.50%

Experiment Overview

Repository ID:	FR-FCM-Z3MC	Experiment name:	Mock community according to Cichocki et al., 2020	MIFlowCyt score:	19.50%
Primary researcher:	Jasmine Heyse	PI/manager:	Nico Boon	Uploaded by:	Jasmine Heyse
Experiment dates:	2020-09-01 -	Dataset uploaded:	Apr 2021	Last updated:	Sep 2021
Keywords:	None		Manuscripts:
Organizations:	Ghent University, Centre for Microbial Ecology and Technology, Gent, (Belgium)
Purpose:	Mock community to test pipeline which links flow cytometric fingerprints with taxonomic composition.The mock community contained three strains (Stenotrophomonas rhizophila DSM 14405, Kocuria rhizophila DSM 348 and Paenibacillus polymyxa DSM 36).
Conclusion:	None
Comments:	None
Funding:	Not disclosed
Quality control:	None

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Help

The following open access article describes how to upload and annotate flow cytometry data sets: Spidlen J, Breuer K and Brinkman R. Preparing a Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) Compliant Manuscript Using the International Society for Advancement of Cytometry (ISAC) FCS File Repository (FlowRepository.org). Current Protocols in Cytometry, UNIT 10.18, July 2012.
We also have a Quick start guide and a FAQ section.
You may download slides from our Workshop at CYTO 2012: Publishing MIFlowCyt Compliant Data to ISAC’s FlowRepository.org for Cytometry A and Other Journals
Additional links and help options are listed in our support page.
You can contact us for support regarding technical issues or by sending comments about how to make your experiment or FlowRepository in general better. Leave feedback or ask questions by filling out a support ticket.

Citing FlowRepository

Please reference us by citing:

Spidlen J, Breuer K, Rosenberg C, Kotecha N and Brinkman RR. FlowRepository - A Resource of Annotated Flow Cytometry Datasets Associated with Peer-reviewed Publications. Cytometry A. 2012 Sep; 81(9):727-31..

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