Experiment Overview
| Repository ID: | FR-FCM-Z4HX | Experiment name: | Phenotypic analysis of the pediatric immune response to SARS-CoV-2 by flow cytometry | MIFlowCyt score: | 46.25% |
| Primary researcher: | Freya Sibbertsen | PI/manager: | Gabor Dunay | Uploaded by: | Freya Sibbertsen |
| Experiment dates: | 2020-04-01 - 2021-09-30 | Dataset uploaded: | Sep 2021 | Last updated: | Jan 2022 |
| Keywords: | [T cell] [B cell] [children] [PhenoGraph] [COVID-19] [UMAP] [Innate cells] | Manuscripts: | [34953025] |
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| Organizations: |
University Medical Center Hamburg-Eppendorf, Hamburg, (Germany)
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| Purpose: | This repository contains all raw data files for unbiased clustering using the R‐based algorithm PhenoGraph, as well as the concatenated .fcs files containing the Uniform Manifold Approximation and Projection analysis (UMAP). The data have gone through cleanup and manual compensation adjustments using the attached matrices. For further details see the publication. | ||||
| Conclusion: | None | ||||
| Comments: | Panel 1 = Panel T. Panel 2 = Panel B. See "Experiment Date" in the .fcs metadata of Panel B for the corresponding compensation matrix. For Panel T, acquisition defined compensation was applied. | ||||
| Funding: | See the publication. | ||||
| Quality control: | See Methods and Supplementary Data. | ||||
