Experiment Overview
| Repository ID: | FR-FCM-Z568 | Experiment name: | Single cell phenotypes as biomarker for evaluating the bacterial-fungal interaction: Case study in Staphylococcus and Malassezia | MIFlowCyt score: | 70.50% |
| Primary researcher: | Eun Sun Lyou | PI/manager: | Eun Sun Lyou | Uploaded by: | Eun Sun Lyou |
| Experiment dates: | 2021-02-15 - 2022-03-30 | Dataset uploaded: | Mar 2022 | Last updated: | May 2022 |
| Keywords: | [phenotype] [Bacterial-fungal interaction] [Staphylococcus] [Malassezia] [Skin microbiome] [Raman spectroscopy] | Manuscripts: | |||
| Organizations: |
Yonsei University, Yonsei University, Wonju-si, Gang'weondo (South Korea)
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| Purpose: | Observe chemical interactions between skin-dominant bacteria and fungi, Staphylococcus aureus and Malassezia. | ||||
| Conclusion: | The presence of M. restricta increases the viability of Staphylococcus | ||||
| Comments: | . | ||||
| Funding: | This work was supported by the National Research Foundation of Korea (NRF) grant funded by the Korea government (MSIT) (No.2019R1A4A1024764) | ||||
| Quality control: | Flow Cytometry Data Analysis using R (2013 Bioinformatics Workshop) | . | |||
Experiment variables
| Conditions | |
|---|---|
| · axenic | Axenic S. aureus 12h.fcs · Axenic S. epidermidis 12h.fcs · Axenic S. epidermidis 24h.fcs · Axenic s. aureus 24h.fcs |
| · co-culturing | Co-culture S. aureus 24h.fcs · Co-culture S. epidermidis 12h.fcs · Co-culture S. epidermidis 24h.fcs · Co-culture s. aureus 12h.fcs |
| Individuals | |
|---|---|
| · s. aureus | Axenic S. aureus 12h.fcs · Axenic s. aureus 24h.fcs · Co-culture S. aureus 24h.fcs · Co-culture s. aureus 12h.fcs |
| · s. epidermidis | Axenic S. epidermidis 12h.fcs · Axenic S. epidermidis 24h.fcs · Co-culture S. epidermidis 12h.fcs · Co-culture S. epidermidis 24h.fcs |
| Sample Type | |
|---|---|
| · axenic | Axenic S. aureus 12h.fcs · Axenic S. epidermidis 12h.fcs · Axenic S. epidermidis 24h.fcs · Axenic s. aureus 24h.fcs |
| · co-culturing | Co-culture S. aureus 24h.fcs · Co-culture S. epidermidis 12h.fcs · Co-culture S. epidermidis 24h.fcs · Co-culture s. aureus 12h.fcs |
