FlowRepository

Notice: Temporary Suspension of New Experiment Creation
We have temporarily disabled the creation of new experiments as we are continuously running out of space. This issue has been impacting both uploads and downloads from FlowRepository. By taking this step, we aim to make downloads of existing data more reliable.
We apologize for the inconvenience and appreciate your understanding as we work on upgrading our hardware and improving the overall solution.
Thank you for your patience.

Experiment: CyTOFmerge Integrating mass cytometry data across multiple panels
ID: FR-FCM-ZYVJ
Primary Researcher: Tamim Abdelaal
MIFlowCyt Score: 15.00%

Experiment Overview

Repository ID:	FR-FCM-ZYVJ	Experiment name:	CyTOFmerge Integrating mass cytometry data across multiple panels	MIFlowCyt score:	15.00%
Primary researcher:	Tamim Abdelaal	PI/manager:	Tamim Abdelaal	Uploaded by:	Tamim Abdelaal
Experiment dates:	2016-12-01 -	Dataset uploaded:	Feb 2019	Last updated:	Feb 2019
Keywords:	None		Manuscripts:
Organizations:	None
Purpose:	We propose a method to integrate several CyTOF datasets measured using different marker panels, having some overlapping markers, on the same samples, .
Conclusion:	None
Comments:	None
Funding:	Not disclosed
Quality control:	None

Download FCS Files or login and see the dataset in your inbox for further annotation details.

« Back to All Public Experiments

« Back to Start Page

Help

The following open access article describes how to upload and annotate flow cytometry data sets: Spidlen J, Breuer K and Brinkman R. Preparing a Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) Compliant Manuscript Using the International Society for Advancement of Cytometry (ISAC) FCS File Repository (FlowRepository.org). Current Protocols in Cytometry, UNIT 10.18, July 2012.
We also have a Quick start guide and a FAQ section.
You may download slides from our Workshop at CYTO 2012: Publishing MIFlowCyt Compliant Data to ISAC’s FlowRepository.org for Cytometry A and Other Journals
Additional links and help options are listed in our support page.
You can contact us for support regarding technical issues or by sending comments about how to make your experiment or FlowRepository in general better. Leave feedback or ask questions by filling out a support ticket.

Citing FlowRepository

Please reference us by citing:

Spidlen J, Breuer K, Rosenberg C, Kotecha N and Brinkman RR. FlowRepository - A Resource of Annotated Flow Cytometry Datasets Associated with Peer-reviewed Publications. Cytometry A. 2012 Sep; 81(9):727-31..

Supporting journal

Download

FCS files
- Download FCS Files
Attachments
- Euc_Dist_Avg.csv
- NN_distance.csv
- VortexIMPLabels.csv
- VortexORGLabels.csv