Login

Notice: Temporary Suspension of New Experiment Creation
We have temporarily disabled the creation of new experiments as we are continuously running out of space. This issue has been impacting both uploads and downloads from FlowRepository. By taking this step, we aim to make downloads of existing data more reliable.
We apologize for the inconvenience and appreciate your understanding as we work on upgrading our hardware and improving the overall solution.
Thank you for your patience.

Download-button_s

Experiment Overview

Repository ID: FR-FCM-ZZ6B Experiment name: Germinal Center Lymphoma versus Hyperplasia MIFlowCyt score: 61.25%
Primary researcher: Fiona Craig PI/manager: Fiona Craig Uploaded by: Fiona Craig
Experiment dates: 2012-05-01 - 2013-02-22 Dataset uploaded: Feb 2013 Last updated: May 2013
Keywords: [diffuse large B-cell lymphoma] [hyperplasia] [follicular lymphoma] Manuscripts: [23873623] Cytblogo
Organizations: None
Purpose: Data sets to address the question ?What is the best flow cytometric analysis strategy to distinguish germinal center B-cell lymphoma from reactive lymphoid tissue using the 8-color antibody combination: anti-kappa, anti-lambda, CD19, CD20, CD10, CD5, CD38 and CD45 antibodies?? Germinal center lymphoma, n=48. Lymphoid hyperplasia, including germinal center cells, n=52.
Conclusion: Application of the computational tools flowType and RchyOptimyx (cellular hieraRCHY OPYIMization) highlighted the diagnostic utility of identifying CD10 positive, CD38 negative B-cells in the distinction between GC-L and GC-H.
Comments: None
Funding: Not disclosed
Quality control: Clinical laboratory procedures employed to reduce sources of variability including standardized sample preparation and staining, lot-to-lot comparison of reagents, and cloning of instrument settings.


Experiment variables

Individuals
· Lymphoma LNA10_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA11_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA15_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA16_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA17_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA18_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA20_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA21_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA22_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA23_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA24_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA3_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA8_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA100_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA27_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA28_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA29_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA32_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA33_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA37_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA38_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA40_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA42_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA43_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA44_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA45_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA50_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA51_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA52_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA55_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA57_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA59_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA63_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA66_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA72_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA73_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA76_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA77_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA79_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA80_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA82_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA83_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA84_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA85_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA91_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA92_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA93_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA94_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA96_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA97_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA98_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA99_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs
· Hyperplasia LNA12_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA13_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA14_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA19_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA1_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA25_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA2_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA4_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA5_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA6_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA7_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA9_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA26_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA30_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA31_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA34_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA35_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA36_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA39_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA41_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA46_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA47_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA48_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA49_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA53_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA54_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA56_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA58_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA60_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA61_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA62_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA64_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA65_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA67_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA68_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA69_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA70_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA71_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA74_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA75_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA78_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA81_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA86_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA87_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA88_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA89_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA90_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs · LNA95_K,2f,L,2f,CD5,2f,CD19,2f,CD10,2f,CD38,2f,CD20,2f,CD45.fcs

Download FCS Files or login and see the dataset in your inbox for further annotation details.