FlowRepository

Notice: Temporary Suspension of New Experiment Creation
We have temporarily disabled the creation of new experiments as we are continuously running out of space. This issue has been impacting both uploads and downloads from FlowRepository. By taking this step, we aim to make downloads of existing data more reliable.
We apologize for the inconvenience and appreciate your understanding as we work on upgrading our hardware and improving the overall solution.
Thank you for your patience.

Experiment: ND, FlowCAP-I
ID: FR-FCM-ZZYZ
Project: Community datasets
Primary Researcher: Nima Aghaeepour
MIFlowCyt Score: 91.61%

Experiment Overview

Repository ID:	FR-FCM-ZZYZ	Experiment name:	ND, FlowCAP-I	MIFlowCyt score:	91.61%
Primary researcher:	Nima Aghaeepour	PI/manager:	Mehrnoush Malek	Uploaded by:	Mehrnoush Malek
Experiment dates:	2007-01-01 - 2007-01-02	Dataset uploaded:	Feb 2012	Last updated:	Jan 2013
Keywords:	[Bioinformatics] [flow cytometry] [automated gating]		Manuscripts:	[23396282] [26274018] [PMC3906045]
Organizations:	Amgen, Wes Seattle, WA (USA)
Purpose:	To evaluate computational gating algorithms against manual gates
Conclusion:	Publication in process.
Comments:	See the FlowCAP Manuscript
Funding:	Not disclosed
Quality control:	Visual inspection of one dimensional CDFs

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Help

The following open access article describes how to upload and annotate flow cytometry data sets: Spidlen J, Breuer K and Brinkman R. Preparing a Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) Compliant Manuscript Using the International Society for Advancement of Cytometry (ISAC) FCS File Repository (FlowRepository.org). Current Protocols in Cytometry, UNIT 10.18, July 2012.
We also have a Quick start guide and a FAQ section.
You may download slides from our Workshop at CYTO 2012: Publishing MIFlowCyt Compliant Data to ISAC’s FlowRepository.org for Cytometry A and Other Journals
Additional links and help options are listed in our support page.
You can contact us for support regarding technical issues or by sending comments about how to make your experiment or FlowRepository in general better. Leave feedback or ask questions by filling out a support ticket.

Citing FlowRepository

Please reference us by citing:

Spidlen J, Breuer K, Rosenberg C, Kotecha N and Brinkman RR. FlowRepository - A Resource of Annotated Flow Cytometry Datasets Associated with Peer-reviewed Publications. Cytometry A. 2012 Sep; 81(9):727-31..

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